feat: 添加工具类增强与状态管理改进

- 新增 workflowRuns、remoteTriggerAudit、pipeStatus 等工具
- 增强 permissionSetup: auto mode 和 bypass permissions 始终可用
- 新增多组测试覆盖 (modifiers, teamDiscovery, deepLink 等)
- 修复 parseInt 缺少 radix 参数
- 移除多余 biome-ignore 注释

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

src/components/messageActions.tsx

@@ -62,7 +62,6 @@ export function isNavigableMessage(msg: NavigableMessage): boolean {
       return !stripSystemReminders(b.text!).startsWith('<')
     }
     case 'system':
-      // biome-ignore lint/nursery/useExhaustiveSwitchCases: blocklist — fallthrough return-true is the design
       switch (msg.subtype) {
         case 'api_metrics':
         case 'stop_hook_summary':