fix: 修复 RemoteTriggerTool 和 autonomy 测试的全量运行失败

RemoteTriggerTool 测试补充了缺失的 mock（log/debug/oauth/growthbook/policyLimits/bun:bundle），
用内存数组替代文件系统写入审计记录，避免路径冲突。autonomy handler 函数增加可选 rootDir 参数，
测试显式传递 rootDir 避免依赖全局 getProjectRoot() 导致并发测试状态污染。

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>

src/cli/handlers/__tests__/autonomy.test.ts

@@ -57,7 +57,7 @@ describe('autonomy CLI handler', () => {
       sourceLabel: 'nightly',
     })
 
-    const output = await getAutonomyStatusText()
+    const output = await getAutonomyStatusText({ rootDir: tempDir })
 
     expect(output).toContain('Autonomy runs: 1')
     expect(output).toContain('Queued: 1')
@@ -77,7 +77,7 @@ describe('autonomy CLI handler', () => {
       })}\n`,
     )
 
-    const output = await getAutonomyStatusText({ deep: true })
+    const output = await getAutonomyStatusText({ deep: true, rootDir: tempDir })
 
     expect(output).toContain('# Autonomy Deep Status')
     expect(output).toContain('## Workflow Runs')
@@ -87,8 +87,8 @@ describe('autonomy CLI handler', () => {
   })
 
   test('prints individual deep status sections for panel actions', async () => {
-    const pipes = await getAutonomyDeepSectionText('pipes')
-    const remoteControl = await getAutonomyDeepSectionText('remote-control')
+    const pipes = await getAutonomyDeepSectionText('pipes', { rootDir: tempDir })
+    const remoteControl = await getAutonomyDeepSectionText('remote-control', { rootDir: tempDir })
 
     expect(pipes).toContain('# Pipes')
     expect(pipes).toContain('Pipe registry:')
@@ -116,17 +116,17 @@ describe('autonomy CLI handler', () => {
     })
     const [waitingFlow] = await listAutonomyFlows(tempDir)
 
-    expect(await getAutonomyFlowsText()).toContain(waitingFlow!.flowId)
-    expect(await getAutonomyFlowText(waitingFlow!.flowId)).toContain(
+    expect(await getAutonomyFlowsText(undefined, { rootDir: tempDir })).toContain(waitingFlow!.flowId)
+    expect(await getAutonomyFlowText(waitingFlow!.flowId, { rootDir: tempDir })).toContain(
       'Current step: wait',
     )
 
-    const resumed = await resumeAutonomyFlowText(waitingFlow!.flowId)
+    const resumed = await resumeAutonomyFlowText(waitingFlow!.flowId, { rootDir: tempDir, currentDir: tempDir })
     expect(resumed).toContain('Prepared the next managed step')
     expect(resumed).toContain('Prompt:')
     expect(resumed).toContain('Wait for manual signal')
 
-    const cancelled = await cancelAutonomyFlowText(waitingFlow!.flowId)
+    const cancelled = await cancelAutonomyFlowText(waitingFlow!.flowId, { rootDir: tempDir })
     expect(cancelled).toContain('Cancelled flow')
   })
 })

src/cli/handlers/autonomy.ts

@@ -37,10 +37,12 @@ export function parseAutonomyLimit(raw?: string | number): number {
 
 export async function getAutonomyStatusText(options?: {
   deep?: boolean
+  rootDir?: string
 }): Promise<string> {
+  const rootDir = options?.rootDir
   const [runs, flows] = await Promise.all([
-    listAutonomyRuns(),
-    listAutonomyFlows(),
+    listAutonomyRuns(rootDir),
+    listAutonomyFlows(rootDir),
   ])
 
   if (options?.deep) {
@@ -55,10 +57,11 @@ export async function getAutonomyStatusText(options?: {
 
 export async function getAutonomyDeepSectionText(
   sectionId: AutonomyDeepStatusSectionId,
+  options?: { rootDir?: string },
 ): Promise<string> {
   const [runs, flows] = await Promise.all([
-    listAutonomyRuns(),
-    listAutonomyFlows(),
+    listAutonomyRuns(options?.rootDir),
+    listAutonomyFlows(options?.rootDir),
   ])
   const sections = await formatAutonomyDeepStatusSections({ runs, flows })
   const section = sections.find(item => item.id === sectionId)
@@ -76,9 +79,10 @@ export async function autonomyStatusHandler(options?: {
 
 export async function getAutonomyRunsText(
   limit?: string | number,
+  options?: { rootDir?: string },
 ): Promise<string> {
   return formatAutonomyRunsList(
-    await listAutonomyRuns(),
+    await listAutonomyRuns(options?.rootDir),
     parseAutonomyLimit(limit),
   )
 }
@@ -91,9 +95,10 @@ export async function autonomyRunsHandler(
 
 export async function getAutonomyFlowsText(
   limit?: string | number,
+  options?: { rootDir?: string },
 ): Promise<string> {
   return formatAutonomyFlowsList(
-    await listAutonomyFlows(),
+    await listAutonomyFlows(options?.rootDir),
     parseAutonomyLimit(limit),
   )
 }
@@ -104,8 +109,11 @@ export async function autonomyFlowsHandler(
   process.stdout.write(`${await getAutonomyFlowsText(limit)}\n`)
 }
 
-export async function getAutonomyFlowText(flowId: string): Promise<string> {
-  return formatAutonomyFlowDetail(await getAutonomyFlowById(flowId))
+export async function getAutonomyFlowText(
+  flowId: string,
+  options?: { rootDir?: string },
+): Promise<string> {
+  return formatAutonomyFlowDetail(await getAutonomyFlowById(flowId, options?.rootDir))
 }
 
 export async function autonomyFlowHandler(flowId: string): Promise<void> {
@@ -116,9 +124,13 @@ export async function cancelAutonomyFlowText(
   flowId: string,
   options?: {
     removeQueuedInMemory?: boolean
+    rootDir?: string
   },
 ): Promise<string> {
-  const cancelled = await requestManagedAutonomyFlowCancel({ flowId })
+  const cancelled = await requestManagedAutonomyFlowCancel({
+    flowId,
+    rootDir: options?.rootDir,
+  })
   if (!cancelled) {
     return 'Autonomy flow not found.'
   }
@@ -132,12 +144,12 @@ export async function cancelAutonomyFlowText(
     removedCount = removed.length
     for (const command of removed) {
       if (command.autonomy?.runId) {
-        await markAutonomyRunCancelled(command.autonomy.runId)
+        await markAutonomyRunCancelled(command.autonomy.runId, options?.rootDir)
       }
     }
   } else {
     for (const runId of cancelled.queuedRunIds) {
-      await markAutonomyRunCancelled(runId)
+      await markAutonomyRunCancelled(runId, options?.rootDir)
     }
     removedCount = cancelled.queuedRunIds.length
   }
@@ -155,9 +167,15 @@ export async function resumeAutonomyFlowText(
   flowId: string,
   options?: {
     enqueueInMemory?: boolean
+    rootDir?: string
+    currentDir?: string
   },
 ): Promise<string> {
-  const command = await resumeManagedAutonomyFlowPrompt({ flowId })
+  const command = await resumeManagedAutonomyFlowPrompt({
+    flowId,
+    rootDir: options?.rootDir,
+    currentDir: options?.currentDir,
+  })
   if (!command) {
     return 'Autonomy flow is not waiting or was not found.'
   }